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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6006462 chr22:44344776 A/C ALG12 chr22:50293877-50312106:- -0.67 -9.2 1.1E-18 Box Plot
THCA rs6006462 chr22:44344776 A/C ANKRD54 chr22:38226862-38245334:- -0.68 -9.02 4.58E-18 Box Plot
THCA rs6006462 chr22:44344776 A/C AP1B1 chr22:29723669-29819168:- -0.91 -10.56 1.44E-23 Box Plot
THCA rs6006462 chr22:44344776 A/C APOBEC3C chr22:39410088-39416357:+ -0.48 -6.39 3.88E-10 Box Plot
THCA rs6006462 chr22:44344776 A/C APOBEC3F chr22:39436609-39449915:+ -0.6 -7.86 2.62E-14 Box Plot
THCA rs6006462 chr22:44344776 A/C ARFGAP3 chr22:43192508-43254112:- -0.73 -8.67 6.71E-17 Box Plot
THCA rs6006462 chr22:44344776 A/C ARSA chr22:51061182-51066601:- -0.55 -5.88 7.52E-9 Box Plot
THCA rs6006462 chr22:44344776 A/C ASCC2 chr22:30184597-30234293:- -0.74 -9.38 2.74E-19 Box Plot
THCA rs6006462 chr22:44344776 A/C ATXN10 chr22:46067678-46241187:+ -0.81 -9.61 4.27E-20 Box Plot
THCA rs6006462 chr22:44344776 A/C AUTS2 chr7:69063905-70258054:+ -0.56 -6.27 8.04E-10 Box Plot
THCA rs6006462 chr22:44344776 A/C BCR chr22:23521891-23660224:+ -0.56 -6.9 1.64E-11 Box Plot
THCA rs6006462 chr22:44344776 A/C BRD1 chr22:50166931-50221160:- -0.78 -9.77 1.17E-20 Box Plot
THCA rs6006462 chr22:44344776 A/C C22orf13 chr22:24936406-24951903:- -0.65 -7.95 1.32E-14 Box Plot
THCA rs6006462 chr22:44344776 A/C C22orf23 chr22:38339057-38349676:- -0.56 -6.73 5.02E-11 Box Plot
THCA rs6006462 chr22:44344776 A/C C22orf28 chr22:32783562-32808274:- -0.52 -7.22 2.05E-12 Box Plot